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Dr. Son's Lymph Node, First Steps

Find the one.
Make it a hundred thousand.

A dendritic cell arrives at a lymph node carrying a fragment of antigen. Inside, naive T cells are packed tight โ€” but only about one in a million can recognise that fragment.
And yet it gets found, within days. That one then becomes hundreds of thousands of killer T cells and leaves for the tumour.
These 20 lessons follow those days at the level of molecules โ€” the search problem, maturation and danger signals, signals 1, 2 and 3, the immunological synapse, autocrine IL-2, the Rb brake, clonal expansion. Python runs right inside this page.

๐Ÿ Python๐Ÿ” the search problem๐Ÿค immunological synapse ๐Ÿšฆ signals 1-2-3๐Ÿ“ˆ clonal expansionโš”๏ธ CTL arming๐Ÿ‡ฌ๐Ÿ‡ง English
Start lesson 1 โ†’

How you'll learn

๐Ÿ”Seen as a search problem

There are 10ยนโธ possible TCRs and only billions of T cells โ€” a hundred million times more kinds than cells. And yet the right one is found. We calculate why.

๐ŸšฆThere are three signals

The TCR alone does not switch a T cell on. Without the second signal it switches off instead โ€” tolerance. We work out why it is built that way.

๐Ÿ“ˆThe arithmetic of one becoming many

Doubling every ten hours, twenty times over, is a million. You count out why that looks slow at first and then suddenly is not.

๐ŸงฌOn Rosie's story

Not a made-up example. We follow what actually happened to the one T cell that recognised nine letters โ€” SVDGQVYIP.

Full curriculum

01
์ฃผ์†Œ๋ฅผ ๋„˜๊ธด ๋’ค โ€” ๋ฐฑ์‹ ์˜ ์ผ์ด ๋๋‚˜๋Š” ์ž๋ฆฌ
์ œ13์žฅ ใ€Œ์ด์ œ๋ถ€ํ„ฐ๋Š” ์ž์‹ ์ด ํ•  ์ˆ˜ ์žˆ๋Š” ์ผ์ด ์—†์—ˆ๋‹คใ€
โœ“
02
๊ฒ€์ƒ‰ ๋ฌธ์ œ โ€” ๊ฐ€์ง“์ˆ˜๊ฐ€ ๊ฐœ์ˆ˜๋ณด๋‹ค ์–ต ๋ฐฐ ๋งŽ๋‹ค
์ œ13์žฅ ใ€Œ๊ฐ€๋Šฅํ•œ ์ข…๋ฅ˜๊ฐ€ ์‹ค์ œ ๊ฐœ์ˆ˜๋ณด๋‹ค ์–ต ๋ฐฐ์ฏค ๋งŽ๋‹คใ€
โœ“
03
์ˆ˜์ง€์ƒ์„ธํฌ โ€” ์ •์ฐฐ๋ณ‘์ด์ž ์ „๋ น
์ œ13์žฅ ใ€Œ๋ฉด์—ญ๊ณ„์˜ ์ •์ฐฐ๋ณ‘์ด์ž ์ „๋ น์ด๋‹ค. ๋ฐฑ์‹ ์ด ๋…ธ๋ฆฌ๋Š” ๊ฒƒ์€ ์˜ค์ง ์ด ์„ธํฌ๋‹คใ€
โœ“
04
์„ฑ์ˆ™ โ€” ์‚ผํ‚จ ๊ฒƒ๋งŒ์œผ๋กœ๋Š” ์•ˆ ๋œ๋‹ค
์ œ13์žฅ ใ€Œ์‚ผํ‚ค๊ธฐ๋งŒ ํ•œ ์ƒํƒœ๋กœ T์„ธํฌ๋ฅผ ๋งŒ๋‚˜๋ฉด ์˜คํžˆ๋ ค ๋ฐ˜๋Œ€ ๊ฒฐ๊ณผ๊ฐ€ ๋‚˜์˜จ๋‹คใ€
โœ“
05
CCR7 ๋‚˜์นจ๋ฐ˜ โ€” ์กฐ์ง์„ ํ—ค์น˜๊ณ  ๋ฆผํ”„์ ˆ๋กœ
์ œ13์žฅ ใ€ŒCCR7์ด ์ƒํ–ฅ ์กฐ์ ˆ๋๋‹ค. ์ด๊ฒƒ์ด ๋ฆผํ”„์ ˆ์„ ํ–ฅํ•œ ๋‚˜์นจ๋ฐ˜์ด์—ˆ๋‹คใ€
โœ“
06
๋ฆผํ”„์ ˆ โ€” ๋งŒ๋‚˜๋„๋ก ์ง€์–ด์ง„ ๊ฑด๋ฌผ
์ œ13์žฅ ใ€Œ๋ฆผํ”„์ ˆ์˜ ๊ตฌ์กฐ ์ž์ฒด๊ฐ€ ๋งŒ๋‚จ์„ ์œ„ํ•ด ๋งŒ๋“ค์–ด์ ธ ์žˆ๋‹คใ€
โœ“
07
HEV โ€” ๋‚˜์ด๋ธŒ T์„ธํฌ๊ฐ€ ๋“ค์–ด์˜ค๋Š” ์ „์šฉ๋ฌธ
์ œ13์žฅ ใ€Œ๊ณ ๋‚ดํ”ผ ์„ธ์ •๋งฅ์„ ํ†ตํ•ด ํ˜ˆ๋ฅ˜์—์„œ ๋“ค์–ด์˜จ T์„ธํฌ๋“ค์ด์—ˆ๋‹คใ€
โœ“
08
์ˆœ์ฐฐ โ€” ํ•˜๋ฃจ์— ์ˆ˜์ฒœ ๊ฐœ๋ฅผ ์Šค์นœ๋‹ค
์ œ13์žฅ ใ€Œ์ˆ˜๋ฐฑ๋งŒ ๋ฒˆ์˜ ์ ‘์ด‰. ์ˆ˜๋ฐฑ๋งŒ ๋ฒˆ์˜ ๋ถˆ์ผ์น˜ใ€
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09
์‹ ํ˜ธ 1 โ€” ๋ถ™๋Š” ํž˜์ด ์•„๋‹ˆ๋ผ ๋ถ™์–ด ์žˆ๋Š” ์‹œ๊ฐ„
์ œ13์žฅ ใ€Œ๊ฒฐํ•ฉ ์นœํ™”๋„ Kd๋Š” ๋ถ™๋Š” ํž˜์ด๋ผ๊ธฐ๋ณด๋‹ค ๋ถ™์–ด ์žˆ๋Š” ์‹œ๊ฐ„์— ๊ฐ€๊น๋‹คใ€
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10
์‹ ํ˜ธ 2 โ€” ๋‘ ๋ฒˆ์งธ ์•…์ˆ˜๊ฐ€ ์—†์œผ๋ฉด ๊บผ์ง„๋‹ค
์ œ13์žฅ ใ€Œ๋‘ ๋ฒˆ์งธ ์•…์ˆ˜๊ฐ€ ์—†์œผ๋ฉด ์˜คํžˆ๋ ค ๊บผ์ง„๋‹คใ€
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11
์‹ ํ˜ธ 3 โ€” ์ผœ๋Š” ๊ฒƒ๊ณผ ์–ด๋–ค ๊ตฐ๋Œ€๊ฐ€ ๋ ์ง€๋Š” ๋‹ค๋ฅธ ๋ฌธ์ œ
์ œ13์žฅ ใ€ŒTNF-ฮฑ, IL-12, IL-6๊ฐ€ ๋ถ„๋น„๋˜๊ธฐ ์‹œ์ž‘ํ–ˆ๋‹คใ€
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12
๋ฉด์—ญ ์‹œ๋ƒ…์Šค โ€” ๊ณผ๋… ๋ชจ์–‘์œผ๋กœ ๋ชจ์ธ๋‹ค
์ œ13์žฅ ใ€ŒcSMAC ๊ณผ pSMAC โ€” ๊ณผ๋… ๋ชจ์–‘์ด๋‹คใ€
โœ“
13
๋„๋ฏธ๋…ธ โ€” ๋ฐ”๊นฅ์˜ ์ผ์„ ์•ˆ์œผ๋กœ ์ „ํ•œ๋‹ค
์ œ13์žฅ ใ€ŒLck โ†’ ZAP-70 โ†’ LAT โ†’ PLC-ฮณ1ใ€
โœ“
14
์„ธ ์ค„๊ธฐ โ€” ์…‹์ด ๋‹ค ์™€์•ผ ๋ฌธ์ด ์—ด๋ฆฐ๋‹ค
์ œ13์žฅ ใ€Œ์„ธ ์ค„์ด ๋ชจ๋‘ ํ•ต์— ๋„์ฐฉํ–ˆ๋‹ค. ์…‹์ด ๋‹ค ์™€์•ผ ๋ฌธ์ด ์—ด๋ฆฐ๋‹คใ€
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15
IL-2 โ€” ์ž๊ธฐ๊ฐ€ ์“ฐ๊ณ  ์ž๊ธฐ๊ฐ€ ์ฝ๋Š” ๋ช…๋ น
์ œ13์žฅ ใ€Œ๋ถ„์—ดํ•˜๋ผ ๋Š” ๋ช…๋ น์„ ์ž๊ธฐ๊ฐ€ ์“ฐ๊ณ  ์ž๊ธฐ๊ฐ€ ์ฝ๋Š” ๊ฒƒ์ด๋‹คใ€
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16
Rb ๋ธŒ๋ ˆ์ดํฌ โ€” ์‹ ํ˜ธ๋Š” ๋ฐœ์„ ๋–ผ๊ฒŒ ํ•  ๋ฟ์ด๋‹ค
์ œ13์žฅ ใ€Œ๋ธŒ๋ ˆ์ดํฌ๋ฅผ ๋ฐŸ๊ณ  ์žˆ๋Š” ๊ฒƒ์ด ๊ธฐ๋ณธ ์ƒํƒœ๊ณ , ์‹ ํ˜ธ๋Š” ๊ทธ ๋ฐœ์„ ๋–ผ๊ฒŒ ํ•  ๋ฟ์ด๋‹คใ€
โœ“
17
ํด๋ก  ํ™•์žฅ โ€” ํ•˜๋‚˜๊ฐ€ ์ˆ˜์‹ญ๋งŒ์ด ๋˜๋Š” ์‚ฐ์ˆ˜
์ œ13์žฅ ใ€Œ์Šค๋ฌด ๋ฒˆ ๋ฐ˜๋ณตํ•˜๋ฉด ๋ฐฑ๋งŒ ๊ฐœ๊ฐ€ ๋œ๋‹คใ€
โœ“
18
๋ฌด์žฅ โ€” ๋ฌด๊ธฐ๊ฐ€ ๋„ท์ธ ๋ฐ๋Š” ์ด์œ ๊ฐ€ ์žˆ๋‹ค
์ œ13์žฅ ใ€Œํผํฌ๋ฆฐ ยท ๊ทธ๋žœ์ž์ž„ B ยท FasL ยท TRAILใ€
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19
๋‚˜์นจ๋ฐ˜์„ ๋ฐ”๊ฟ” ๋‹จ๋‹ค โ€” ๋ฆผํ”„์ ˆ์„ ๋– ๋‚œ๋‹ค
์ œ13์žฅ ใ€ŒCCR7์ด ํ•˜ํ–ฅ ์กฐ์ ˆ๋˜๊ณ  CXCR3๊ฐ€ ์ƒํ–ฅ ์กฐ์ ˆ๋๋‹คใ€
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20
๋ฉฐ์น ์ด ๊ฑธ๋ฆฌ๋Š” ์ด์œ  โ€” ๊ทธ๋ฆฌ๊ณ  ๋งํ•  ์ˆ˜ ์žˆ๋Š” ๊ฒƒ
์ œ13์žฅ ใ€Œ๋‚˜๋จธ์ง€๋Š” ๋กœ์ง€์˜ ๋ฉด์—ญ๊ณ„๊ฐ€ ํ•  ๊ฒƒ์ด์—ˆ๋‹คใ€
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